EnhancerDB
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  3. rs549353619[chr1:21590806]
Enhancers that have rs549353619[chr1:21590806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs549353619[chr1:21590806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21590801 21590811 SP1 JASPAR yes 27288523
chr1 21590801 21590811 ZNF740 JASPAR yes 27288524
chr1 21590801 21590822 ZNF263 JASPAR yes 27288525
chr1 21590802 21590812 SP1 JASPAR yes 27288526
chr1 21590802 21590812 ZNF740 JASPAR yes 27288527
chr1 21590803 21590813 SP1 JASPAR yes 27288528
chr1 21590803 21590813 ZNF740 JASPAR yes 27288529
chr1 21590804 21590814 SP1 JASPAR yes 27288530
chr1 21590804 21590814 ZNF740 JASPAR yes 27288531
chr1 21590805 21590815 ZNF740 JASPAR yes 27288532
Genes associated with rs549353619[chr1:21590806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More