EnhancerDB
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  3. rs549381194[chr16:85579643]
Enhancers that have rs549381194[chr16:85579643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549381194[chr16:85579643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85576695 85579765 ZNF143 GTRD no Epithelial (MCF-7) 21728577
chr16 85578590 85579833 ZNF143 GTRD no Epithelial (MCF-7) 21728595
chr16 85578607 85579925 ZNF143 GTRD no Epithelial (MCF-7) 21728597
chr16 85578624 85579764 TCF7L2 GTRD no Colon (HCT116) 21728598
chr16 85578660 85580416 ZNF274 GTRD no Bone Marrow (K562) 21728600
chr16 85578686 85580273 ZNF274 GTRD no Bone Marrow (K562) 21728601
chr16 85579037 85579684 TCF7L2 GTRD no Colon (HCT116) 21728606
chr16 85579253 85579656 SOX2 GTRD no Neural Stem Cells (H9) 21728611
chr16 85579303 85579670 SOX2 GTRD no Neural Stem Cells (H9) 21728612
chr16 85579359 85580378 ZNF274 GTRD no Bone Marrow (K562) 21728613
chr16 85579574 85580431 ZNF274 GTRD no Bone Marrow (K562) 21728614
chr16 85579634 85579648 PLAG1 JASPAR yes 12074687
Genes associated with rs549381194[chr16:85579643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More