EnhancerDB
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  3. rs549396702[chr1:185613028]
Enhancers that have rs549396702[chr1:185613028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549396702[chr1:185613028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185613024 185613044 RREB1 JASPAR yes 33829609
chr1 185613026 185613046 RREB1 JASPAR yes 33829610
chr1 185613027 185613047 RREB1 JASPAR yes 33829611
chr1 185613028 185613045 ZNF410 JASPAR yes 33829612
Genes associated with rs549396702[chr1:185613028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More