EnhancerDB
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  3. rs549434288[chr6:11597676]
Enhancers that have rs549434288[chr6:11597676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11583745 11623555 enh23028
Brain (SK-N-MC) Astrocyte Uterus Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs549434288[chr6:11597676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11597667 11597678 FLI1 JASPAR yes 99898600
chr6 11597668 11597678 GABPA JASPAR yes 99898601
chr6 11597669 11597677 EHF JASPAR yes 99898602
Genes associated with rs549434288[chr6:11597676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More