EnhancerDB
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  3. rs549435301[chr12:123131788]
Enhancers that have rs549435301[chr12:123131788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123126585 123138619 enh58487
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 123131126 123131793 vista15209
VISTA
Transcript factors that have rs549435301[chr12:123131788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123131010 123132115 P63 GTRD no Skin (Keratinocyte) 21580131
chr12 123131010 123132115 P63 GTRD no Skin (Keratinocyte) 108066017
chr12 123131072 123132038 P63 GTRD no Skin (Keratinocyte) 21580132
chr12 123131072 123132038 P63 GTRD no Skin (Keratinocyte) 108066018
chr12 123131094 123132101 P63 GTRD no Skin (Keratinocyte) 21580133
chr12 123131094 123132101 P63 GTRD no Skin (Keratinocyte) 108066019
chr12 123131159 123131843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066020
chr12 123131175 123131848 P63 GTRD no Skin (Keratinocyte) 21580134
chr12 123131175 123131848 P63 GTRD no Skin (Keratinocyte) 108066021
chr12 123131189 123131819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066022
chr12 123131226 123131862 NFIC UCSC Txn Factor no Conserved 108066024
chr12 123131226 123131862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066025
chr12 123131363 123131819 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108066052
chr12 123131399 123132059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066057
chr12 123131404 123131940 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066059
chr12 123131458 123131819 BHLHE40 UCSC Txn Factor no Conserved 108066066
chr12 123131467 123132452 ZNF274 GTRD no Blood (GM12878) 108066067
chr12 123131481 123131998 ZNF274 GTRD no Cervix (HeLa-S3) 108066070
chr12 123131489 123131819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108066071
chr12 123131523 123132470 ZNF143 GTRD no Epithelial (MCF-7) 21580135
chr12 123131523 123132470 ZNF143 GTRD no Epithelial (MCF-7) 108066072
chr12 123131562 123132239 ZBTB33 GTRD no Lung (A549) 108066074
chr12 123131704 123132405 ZNF274 GTRD no Blood (GM12878) 108066075
chr12 123131778 123131789 NFKB1 JASPAR yes 82491855
chr12 123131778 123131789 NFKB1 JASPAR yes 124286041
chr12 123131785 123131803 IRF2 JASPAR yes 82491856
chr12 123131785 123131803 IRF2 JASPAR yes 124286042
chr12 123131786 123131807 IRF1 JASPAR yes 82491857
chr12 123131786 123131807 IRF1 JASPAR yes 124286043
chr12 123131788 123131803 STAT2 JASPAR yes 82491858
chr12 123131788 123131803 STAT2 JASPAR yes 124286044
Genes associated with rs549435301[chr12:123131788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More