EnhancerDB
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  3. rs549443199[chr6:34650834]
Enhancers that have rs549443199[chr6:34650834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34639385 34654367 enh9070
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Blood (T-cell) Stomach
Transcript factors that have rs549443199[chr6:34650834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34650825 34650845 RREB1 JASPAR yes 101232933
chr6 34650826 34650846 RREB1 JASPAR yes 101232934
chr6 34650827 34650847 RREB1 JASPAR yes 101232935
chr6 34650829 34650850 IRF1 JASPAR yes 101232936
chr6 34650830 34650850 RREB1 JASPAR yes 101232937
chr6 34650832 34650847 FOXP1 JASPAR yes 101232938
chr6 34650834 34650849 FOXP1 JASPAR yes 101232939
chr6 34650834 34650855 IRF1 JASPAR yes 101232940
Genes associated with rs549443199[chr6:34650834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More