EnhancerDB
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  3. rs549461511[chr15:69088200]
Enhancers that have rs549461511[chr15:69088200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 69072185 69092337 enh16270
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549461511[chr15:69088200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 69086221 69090732 ZNF274 GTRD no Cervix (HeLa-S3) 108151356
chr15 69086221 69090732 ZNF274 GTRD no Cervix (HeLa-S3) 108151357
chr15 69086820 69089109 ZNF274 GTRD no Cervix (HeLa-S3) 108151358
chr15 69087038 69089234 ZNF274 GTRD no Cervix (HeLa-S3) 108151360
chr15 69087609 69089013 ZNF274 GTRD no Cervix (HeLa-S3) 108151373
chr15 69087678 69088258 POLR2A UCSC Txn Factor no Conserved 108151377
chr15 69087902 69088422 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21663848
chr15 69087902 69088422 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108151387
chr15 69087926 69088613 TCF7L2 GTRD no Colon (HCT116) 108151388
chr15 69088198 69088217 PAX5 JASPAR yes 24315477
Genes associated with rs549461511[chr15:69088200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More