EnhancerDB
  1. Home
  2. SNP
  3. rs549462800[chr12:124965568]
Enhancers that have rs549462800[chr12:124965568]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549462800[chr12:124965568]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124965550 124965570 RREB1 JASPAR yes 124383120
chr12 124965554 124965574 RREB1 JASPAR yes 124383121
chr12 124965559 124965571 GLI2 JASPAR yes 124383122
chr12 124965559 124965571 ZBTB7C JASPAR yes 124383123
Genes associated with rs549462800[chr12:124965568], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More