EnhancerDB
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  3. rs549471651[chr1:17885677]
Enhancers that have rs549471651[chr1:17885677]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549471651[chr1:17885677]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17885660 17885681 IRF1 JASPAR yes 27101663
chr1 17885664 17885678 IRF8 JASPAR yes 27101664
chr1 17885664 17885679 IRF9 JASPAR yes 27101665
chr1 17885666 17885687 IRF1 JASPAR yes 27101666
chr1 17885668 17885683 STAT2 JASPAR yes 27101667
chr1 17885670 17885685 IRF9 JASPAR yes 27101668
Genes associated with rs549471651[chr1:17885677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More