EnhancerDB
  1. Home
  2. SNP
  3. rs549473582[chr16:68773511]
Enhancers that have rs549473582[chr16:68773511]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs549473582[chr16:68773511]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68773503 68773517 ONECUT1 JASPAR yes 11220320
chr16 68773503 68773517 ONECUT2 JASPAR yes 11220321
chr16 68773503 68773517 ONECUT3 JASPAR yes 11220322
chr16 68773505 68773526 IRF1 JASPAR yes 11220323
chr16 68773506 68773527 IRF1 JASPAR yes 11220324
chr16 68773508 68773529 IRF1 JASPAR yes 11220325
chr16 68773509 68773530 IRF1 JASPAR yes 11220326
chr16 68773510 68773525 FOXP1 JASPAR yes 11220327
chr16 68773510 68773531 IRF1 JASPAR yes 11220328
chr16 68773511 68773526 FOXP1 JASPAR yes 11220329
chr16 68773511 68773532 IRF1 JASPAR yes 11220330
Genes associated with rs549473582[chr16:68773511], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More