EnhancerDB
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  3. rs549488489[chr6:25199935]
Enhancers that have rs549488489[chr6:25199935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25190305 25204995 enh23130
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Brain (SK-N-MC) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs549488489[chr6:25199935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25199929 25199948 RFX2 JASPAR yes 100835026
chr6 25199931 25199946 RFX5 JASPAR yes 100835027
Genes associated with rs549488489[chr6:25199935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More