EnhancerDB
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  3. rs549509480[chr12:102324399]
Enhancers that have rs549509480[chr12:102324399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 102323325 102341935 enh14928
Skin (Keratinocyte) Cervix (HeLa-S3) Kidney Brain (SK-N-MC) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs549509480[chr12:102324399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 102323323 102326491 POLR2A UCSC Txn Factor no Conserved 108054487
chr12 102324015 102326491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21568437
chr12 102324015 102326491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108054488
chr12 102324393 102324405 YY1 JASPAR yes 123281638
chr12 102324398 102324402 YY1 TRANSFAC yes 123281639
Genes associated with rs549509480[chr12:102324399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More