EnhancerDB
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  3. rs549511271[chr1:202081961]
Enhancers that have rs549511271[chr1:202081961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549511271[chr1:202081961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202081377 202082416 ZNF274 GTRD no Bone Marrow (K562) 21367411
chr1 202081535 202082051 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21367412
chr1 202081586 202082489 ZNF274 GTRD no Bone Marrow (K562) 21367413
chr1 202081624 202082154 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21367415
chr1 202081835 202082526 ZNF274 GTRD no Bone Marrow (K562) 21367416
chr1 202081875 202082563 ZNF274 GTRD no Bone Marrow (K562) 21367417
chr1 202081888 202082458 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21367418
chr1 202081929 202082399 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21367419
chr1 202081955 202081970 NR2C2 JASPAR yes 34555241
chr1 202081956 202081970 RXRB JASPAR yes 34555242
chr1 202081956 202081970 RXRG JASPAR yes 34555243
Genes associated with rs549511271[chr1:202081961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More