EnhancerDB
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  3. rs549528727[chr11:65904671]
Enhancers that have rs549528727[chr11:65904671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65889425 65921015 enh1832
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549528727[chr11:65904671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65902166 65904732 ZBTB33 GTRD no Lung (A549) 107982364
chr11 65904138 65904728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21496363
chr11 65904138 65904728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107982387
chr11 65904335 65904671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21496369
chr11 65904335 65904671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107982393
chr11 65904336 65904676 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21496370
chr11 65904336 65904676 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107982394
chr11 65904669 65904675 TBP TRANSFAC yes 39355010
Genes associated with rs549528727[chr11:65904671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More