EnhancerDB
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  3. rs549532158[chr17:40405125]
Enhancers that have rs549532158[chr17:40405125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs549532158[chr17:40405125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40405114 40405129 MYBL2 JASPAR yes 54289966
chr17 40405124 40405145 IRF1 JASPAR yes 54289967
chr17 40405124 40405145 ZNF263 JASPAR yes 54289968
Genes associated with rs549532158[chr17:40405125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More