EnhancerDB
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  3. rs549532297[chr17:70608480]
Enhancers that have rs549532297[chr17:70608480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70592834 70624575 enh32352
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs549532297[chr17:70608480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70607508 70609094 ZNF143 GTRD no Epithelial (MCF-7) 21785728
chr17 70607600 70608982 ZNF143 GTRD no Epithelial (MCF-7) 21785729
chr17 70607697 70608852 ZNF143 GTRD no Epithelial (MCF-7) 21785730
chr17 70607776 70608897 ZNF143 GTRD no Epithelial (MCF-7) 21785731
chr17 70607787 70608854 ZNF143 GTRD no Epithelial (MCF-7) 21785732
chr17 70607794 70608577 ZNF143 GTRD no Epithelial (MCF-7) 21785733
chr17 70607804 70608768 ZNF143 GTRD no Epithelial (MCF-7) 21785734
chr17 70607813 70608824 ZNF143 GTRD no Epithelial (MCF-7) 21785735
chr17 70607833 70608745 ZNF143 GTRD no Epithelial (MCF-7) 21785736
chr17 70607835 70608747 ZNF143 GTRD no Epithelial (MCF-7) 21785737
chr17 70607869 70608739 ZNF143 GTRD no Epithelial (MCF-7) 21785738
chr17 70607894 70608599 ZNF143 GTRD no Epithelial (MCF-7) 21785739
chr17 70607895 70608641 ZNF143 GTRD no Epithelial (MCF-7) 21785740
chr17 70607911 70608609 ZNF143 GTRD no Epithelial (MCF-7) 21785741
chr17 70607917 70608703 ZNF143 GTRD no Epithelial (MCF-7) 21785742
chr17 70607918 70608564 ZNF143 GTRD no Epithelial (MCF-7) 21785743
chr17 70607929 70608546 ZNF143 GTRD no Epithelial (MCF-7) 21785744
chr17 70607938 70608605 ZNF143 GTRD no Epithelial (MCF-7) 21785745
chr17 70607950 70608679 ZNF143 GTRD no Epithelial (MCF-7) 21785746
chr17 70607983 70608776 ZNF143 GTRD no Epithelial (MCF-7) 21785748
chr17 70608039 70608508 ZNF143 GTRD no Epithelial (MCF-7) 21785749
chr17 70608043 70608762 ZNF274 GTRD no Cervix (HeLa-S3) 21785750
chr17 70608113 70608605 ZNF274 GTRD no Cervix (HeLa-S3) 21785751
chr17 70608115 70608741 ZNF143 GTRD no Epithelial (MCF-7) 21785752
chr17 70608120 70608673 ZNF143 GTRD no Epithelial (MCF-7) 21785753
chr17 70608127 70608660 ZNF143 GTRD no Epithelial (MCF-7) 21785754
chr17 70608143 70608654 ZNF274 GTRD no Liver (HepG2) 21785755
chr17 70608314 70609050 ZNF143 GTRD no Epithelial (MCF-7) 21785757
chr17 70608480 70608492 IRF1 JASPAR yes 55808945
chr17 70608480 70608495 FOXP1 JASPAR yes 55808946
chr17 70608480 70608501 IRF1 JASPAR yes 55808947
Genes associated with rs549532297[chr17:70608480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More