EnhancerDB
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  3. rs549550575[chr19:11047108]
Enhancers that have rs549550575[chr19:11047108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549550575[chr19:11047108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11047050 11047417 ZNF143 GTRD no Epithelial (MCF-7) 21849185
chr19 11047094 11047109 HNF1A JASPAR yes 112446091
chr19 11047095 11047108 HNF1B JASPAR yes 112446097
chr19 11047097 11047115 IRF2 JASPAR yes 112446106
chr19 11047100 11047113 ELF3 JASPAR yes 112446107
chr19 11047101 11047111 ELK3 JASPAR yes 112446109
chr19 11047101 11047111 ERF JASPAR yes 112446110
chr19 11047101 11047111 ERG JASPAR yes 112446111
chr19 11047101 11047111 ETS1 JASPAR yes 112446112
chr19 11047101 11047111 ETV1 JASPAR yes 112446113
chr19 11047101 11047111 ETV4 JASPAR yes 112446114
chr19 11047101 11047111 ETV6 JASPAR yes 112446115
chr19 11047101 11047111 FEV JASPAR yes 112446116
chr19 11047101 11047111 FLI1 JASPAR yes 112446117
chr19 11047101 11047112 ELF5 JASPAR yes 112446118
chr19 11047101 11047112 ETV2 JASPAR yes 112446119
chr19 11047101 11047113 EHF JASPAR yes 112446120
chr19 11047101 11047113 ELF1 JASPAR yes 112446121
chr19 11047101 11047113 ELF4 JASPAR yes 112446122
chr19 11047101 11047114 ELF1 JASPAR yes 112446123
chr19 11047101 11047115 SPIC JASPAR yes 112446124
chr19 11047102 11047116 IRF7 JASPAR yes 112446125
chr19 11047103 11047109 ETS1 JASPAR yes 112446126
Genes associated with rs549550575[chr19:11047108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More