EnhancerDB
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  3. rs549556897[chr3:58005880]
Enhancers that have rs549556897[chr3:58005880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57992811 58015944 enh20646
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs549556897[chr3:58005880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58005868 58005880 PKNOX1 JASPAR yes 2665053
chr3 58005868 58005880 TGIF1 JASPAR yes 2665054
chr3 58005868 58005880 TGIF2 JASPAR yes 2665055
Genes associated with rs549556897[chr3:58005880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More