EnhancerDB
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  3. rs549562342[chr6:30739672]
Enhancers that have rs549562342[chr6:30739672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549562342[chr6:30739672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30739671 30739684 NFKB1 JASPAR yes 101047201
chr6 30739671 30739684 NFKB2 JASPAR yes 101047202
Genes associated with rs549562342[chr6:30739672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More