EnhancerDB
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  3. rs549578944[chr17:62713004]
Enhancers that have rs549578944[chr17:62713004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549578944[chr17:62713004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62712953 62716463 ZNF143 GTRD no Epithelial (MCF-7) 21779536
chr17 62712999 62713014 SOX21 JASPAR yes 55316016
chr17 62713001 62713012 YY2 JASPAR yes 55316017
chr17 62713004 62713013 RUNX2 JASPAR yes 55316018
Genes associated with rs549578944[chr17:62713004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More