EnhancerDB
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  3. rs549579402[chr1:110424425]
Enhancers that have rs549579402[chr1:110424425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549579402[chr1:110424425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110424025 110424429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328208
chr1 110424078 110424428 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328209
chr1 110424084 110424448 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328210
chr1 110424184 110424494 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328214
chr1 110424374 110425251 TEF1 GTRD no Bone (Osteoblast) 21328215
Genes associated with rs549579402[chr1:110424425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More