EnhancerDB
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  3. rs549629523[chr1:27458848]
Enhancers that have rs549629523[chr1:27458848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549629523[chr1:27458848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27458835 27458850 STAT1 JASPAR yes 27679851
chr1 27458837 27458848 STAT3 JASPAR yes 27679852
chr1 27458837 27458850 ELF1 JASPAR yes 27679853
chr1 27458838 27458850 ELF4 JASPAR yes 27679854
chr1 27458838 27458851 ELF3 JASPAR yes 27679855
chr1 27458839 27458850 ELF5 JASPAR yes 27679856
chr1 27458840 27458850 ETV6 JASPAR yes 27679857
chr1 27458840 27458851 ELK4 JASPAR yes 27679858
chr1 27458840 27458851 FLI1 JASPAR yes 27679859
chr1 27458841 27458849 EHF JASPAR yes 27679860
chr1 27458841 27458849 FEV JASPAR yes 27679861
chr1 27458842 27458849 SPI1 JASPAR yes 27679862
chr1 27458842 27458856 STAT1 JASPAR yes 27679863
chr1 27458843 27458855 IRF1 JASPAR yes 27679864
Genes associated with rs549629523[chr1:27458848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More