EnhancerDB
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  3. rs549649270[chr17:25879729]
Enhancers that have rs549649270[chr17:25879729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs549649270[chr17:25879729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25879714 25879730 RFX5 JASPAR yes 53644732
chr17 25879720 25879729 NFIX JASPAR yes 53644733
Genes associated with rs549649270[chr17:25879729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More