EnhancerDB
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  3. rs549681747[chr16:89381169]
Enhancers that have rs549681747[chr16:89381169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549681747[chr16:89381169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 21738057
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 108225500
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21738058
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108225501
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 21738059
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 108225502
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 21738060
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 108225503
chr16 89381158 89381172 CREB3L1 JASPAR yes 12330030
chr16 89381159 89381173 TLX1 JASPAR yes 12330031
chr16 89381168 89381174 YY1 JASPAR yes 12330032
Genes associated with rs549681747[chr16:89381169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More