EnhancerDB
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  3. rs549683234[chr15:71039580]
Enhancers that have rs549683234[chr15:71039580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 71031299 71046793 enh31479
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549683234[chr15:71039580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 71039561 71039581 RREB1 JASPAR yes 24466096
chr15 71039562 71039582 RREB1 JASPAR yes 24466098
chr15 71039563 71039583 RREB1 JASPAR yes 24466099
chr15 71039566 71039581 FOXP1 JASPAR yes 24466101
chr15 71039566 71039586 RREB1 JASPAR yes 24466102
chr15 71039574 71039595 IRF1 JASPAR yes 24466103
chr15 71039575 71039596 IRF1 JASPAR yes 24466104
chr15 71039576 71039591 STAT2 JASPAR yes 24466105
chr15 71039577 71039598 IRF1 JASPAR yes 24466106
chr15 71039578 71039599 IRF1 JASPAR yes 24466107
chr15 71039579 71039594 FOXP1 JASPAR yes 24466108
chr15 71039579 71039600 IRF1 JASPAR yes 24466109
chr15 71039580 71039595 FOXP1 JASPAR yes 24466110
chr15 71039580 71039601 IRF1 JASPAR yes 24466111
Genes associated with rs549683234[chr15:71039580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More