EnhancerDB
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  3. rs549716168[chr1:204256705]
Enhancers that have rs549716168[chr1:204256705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549716168[chr1:204256705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204256170 204256740 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370364
chr1 204256170 204256740 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859808
chr1 204256356 204257498 AR GTRD no Prostate (PC-3) 21370371
chr1 204256356 204257498 AR GTRD no Prostate (PC-3) 107859823
chr1 204256695 204256709 MTF1 JASPAR yes 34688532
chr1 204256700 204256710 SP1 JASPAR yes 34688533
Genes associated with rs549716168[chr1:204256705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More