EnhancerDB
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  3. rs549719[chr6:33566581]
Enhancers that have rs549719[chr6:33566581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs549719[chr6:33566581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33566576 33566586 ID4 JASPAR yes 101159147
chr6 33566576 33566586 TCF4 JASPAR yes 101159148
chr6 33566578 33566583 USF2 TRANSFAC yes 101159149
Genes associated with rs549719[chr6:33566581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More