EnhancerDB
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  3. rs549719532[chr1:22348462]
Enhancers that have rs549719532[chr1:22348462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs549719532[chr1:22348462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22348448 22348466 TP53 JASPAR yes 27338721
chr1 22348449 22348469 TP53 JASPAR yes 27338722
chr1 22348456 22348477 IRF1 JASPAR yes 27338723
chr1 22348458 22348479 IRF1 JASPAR yes 27338724
chr1 22348459 22348480 IRF1 JASPAR yes 27338725
chr1 22348460 22348475 FOXP1 JASPAR yes 27338726
chr1 22348460 22348481 IRF1 JASPAR yes 27338727
chr1 22348461 22348476 FOXP1 JASPAR yes 27338728
chr1 22348462 22348477 FOXP1 JASPAR yes 27338729
Genes associated with rs549719532[chr1:22348462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More