EnhancerDB
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  3. rs549729306[chr12:54751973]
Enhancers that have rs549729306[chr12:54751973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54746942 54756928 enh2378
Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs549729306[chr12:54751973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54751779 54752523 POLR2A UCSC Txn Factor no Conserved 108037447
chr12 54751967 54751978 HOXC13 JASPAR yes 121036596
chr12 54751967 54751978 HOXD12 JASPAR yes 121036597
chr12 54751968 54751978 HOXC10 JASPAR yes 121036598
Genes associated with rs549729306[chr12:54751973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More