EnhancerDB
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  3. rs549740041[chr16:85595639]
Enhancers that have rs549740041[chr16:85595639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549740041[chr16:85595639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85595296 85595719 ZNF143 GTRD no Epithelial (MCF-7) 21729254
chr16 85595399 85595903 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729256
chr16 85595412 85596527 TCF7L2 GTRD no Colon (HCT116) 21729257
chr16 85595479 85596577 ZNF274 GTRD no Bone Marrow (K562) 21729258
chr16 85595633 85595647 MTF1 JASPAR yes 12076703
Genes associated with rs549740041[chr16:85595639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More