EnhancerDB
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  3. rs549779210[chr11:128500179]
Enhancers that have rs549779210[chr11:128500179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 128465321 128504408 enh2107
Prostate (PC-3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs549779210[chr11:128500179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 128491042 128500400 ZNF274 GTRD no Blood (GM12878) 21522949
chr11 128491042 128500400 ZNF274 GTRD no Blood (GM12878) 108007179
chr11 128491042 128500400 ZNF274 GTRD no Blood (GM12878) 108007180
chr11 128500173 128500609 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21523055
chr11 128500175 128500195 RREB1 JASPAR yes 42326964
chr11 128500175 128500196 IRF1 JASPAR yes 42326965
chr11 128500179 128500199 RREB1 JASPAR yes 42326966
Genes associated with rs549779210[chr11:128500179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More