EnhancerDB
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  3. rs549793183[chr16:89421674]
Enhancers that have rs549793183[chr16:89421674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549793183[chr16:89421674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89421669 89421674 SP1 TRANSFAC yes 12335440
chr16 89421670 89421675 SP1 TRANSFAC yes 12335441
chr16 89421670 89421679 THAP1 JASPAR yes 12335442
chr16 89421670 89421685 NR2C2 JASPAR yes 12335443
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 21738343
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225805
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225806
chr16 89421673 89421677 LFA1 TRANSFAC yes 12335444
Genes associated with rs549793183[chr16:89421674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More