EnhancerDB
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  3. rs549808550[chr3:56888221]
Enhancers that have rs549808550[chr3:56888221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs549808550[chr3:56888221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56888218 56888233 FOXP1 JASPAR yes 2603782
chr3 56888218 56888239 IRF1 JASPAR yes 2603783
chr3 56888220 56888226 TBP TRANSFAC yes 2603784
chr3 56888220 56888231 FOXC1 JASPAR yes 2603785
chr3 56888220 56888232 FOXC2 JASPAR yes 2603786
chr3 56888221 56888232 FOXP2 JASPAR yes 2603787
Genes associated with rs549808550[chr3:56888221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More