EnhancerDB
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  3. rs549827288[chr17:1896473]
Enhancers that have rs549827288[chr17:1896473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549827288[chr17:1896473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1896467 1896477 SP1 JASPAR yes 52713953
chr17 1896467 1896488 ZNF263 JASPAR yes 52713954
chr17 1896469 1896474 SP1 TRANSFAC yes 52713955
chr17 1896469 1896481 HINFP JASPAR yes 52713956
Genes associated with rs549827288[chr17:1896473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More