EnhancerDB
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  3. rs549849777[chr17:34221073]
Enhancers that have rs549849777[chr17:34221073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs549849777[chr17:34221073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 21751093
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 108251385
chr17 34220673 34221077 ZNF143 GTRD no Epithelial (MCF-7) 21751094
chr17 34220765 34221135 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751095
chr17 34221061 34221074 DUXA JASPAR yes 54019978
chr17 34221062 34221073 DUX4 JASPAR yes 54019979
Genes associated with rs549849777[chr17:34221073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More