EnhancerDB
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  3. rs549871058[chr15:41089908]
Enhancers that have rs549871058[chr15:41089908]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549871058[chr15:41089908]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41089898 41089908 ID4 JASPAR yes 22955528
chr15 41089898 41089908 TCF3 JASPAR yes 22955529
chr15 41089898 41089908 TCF4 JASPAR yes 22955530
Genes associated with rs549871058[chr15:41089908], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More