EnhancerDB
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  3. rs549894580[chr18:53664521]
Enhancers that have rs549894580[chr18:53664521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 53662065 53669555 enh17726
Brain (SK-N-SH) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs549894580[chr18:53664521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 53664500 53664521 IRF1 JASPAR yes 110812433
chr18 53664506 53664527 IRF1 JASPAR yes 110812435
chr18 53664507 53664528 ZNF263 JASPAR yes 110812436
chr18 53664508 53664523 PRDM1 JASPAR yes 110812437
chr18 53664508 53664523 STAT2 JASPAR yes 110812438
chr18 53664509 53664523 STAT1 JASPAR yes 110812439
chr18 53664514 53664525 ELK4 JASPAR yes 110812440
chr18 53664514 53664525 FLI1 JASPAR yes 110812441
chr18 53664514 53664527 ELF3 JASPAR yes 110812442
chr18 53664515 53664526 ELF5 JASPAR yes 110812444
chr18 53664515 53664528 ELF1 JASPAR yes 110812445
chr18 53664516 53664524 FEV JASPAR yes 110812446
Genes associated with rs549894580[chr18:53664521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More