EnhancerDB
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  3. rs549902145[chr1:212090455]
Enhancers that have rs549902145[chr1:212090455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs549902145[chr1:212090455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212088998 212090496 ZNF274 GTRD no Blood (GM12878) 21377511
chr1 212090444 212090455 USF1 JASPAR yes 35091038
chr1 212090444 212090455 USF2 JASPAR yes 35091039
chr1 212090445 212090455 SREBF2 JASPAR yes 35091040
chr1 212090445 212090455 TFE3 JASPAR yes 35091041
chr1 212090445 212090455 TFEB JASPAR yes 35091042
chr1 212090445 212090455 TFEC JASPAR yes 35091043
chr1 212090451 212090456 ATF1 TRANSFAC yes 35091044
Genes associated with rs549902145[chr1:212090455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More