EnhancerDB
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  3. rs549944567[chr6:25165344]
Enhancers that have rs549944567[chr6:25165344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549944567[chr6:25165344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25165330 25165351 IRF1 JASPAR yes 100830137
chr6 25165331 25165346 RUNX2 JASPAR yes 100830138
chr6 25165334 25165348 ONECUT3 JASPAR yes 100830139
chr6 25165336 25165357 IRF1 JASPAR yes 100830140
chr6 25165338 25165353 STAT2 JASPAR yes 100830141
chr6 25165343 25165358 MEF2C JASPAR yes 100830142
Genes associated with rs549944567[chr6:25165344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More