EnhancerDB
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  3. rs549977028[chr19:10864140]
Enhancers that have rs549977028[chr19:10864140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549977028[chr19:10864140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10862452 10865007 ZNF274 GTRD no Bone Marrow (K562) 21848922
chr19 10862452 10865007 ZNF274 GTRD no Bone Marrow (K562) 108383763
chr19 10862597 10865053 ZNF274 GTRD no Bone Marrow (K562) 21848930
chr19 10862597 10865053 ZNF274 GTRD no Bone Marrow (K562) 108383771
chr19 10862627 10865021 ZNF274 GTRD no Bone Marrow (K562) 21848933
chr19 10862627 10865021 ZNF274 GTRD no Bone Marrow (K562) 108383774
chr19 10862676 10864924 ZNF274 GTRD no Bone Marrow (K562) 21848938
chr19 10862676 10864924 ZNF274 GTRD no Bone Marrow (K562) 108383779
chr19 10862682 10864897 ZNF143 GTRD no Epithelial (MCF-7) 21848939
chr19 10862682 10864897 ZNF143 GTRD no Epithelial (MCF-7) 108383780
chr19 10862692 10864268 ZNF274 GTRD no Bone Marrow (K562) 21848942
chr19 10862692 10864268 ZNF274 GTRD no Bone Marrow (K562) 108383783
chr19 10862759 10864202 ZNF143 GTRD no Epithelial (MCF-7) 21848950
chr19 10862759 10864202 ZNF143 GTRD no Epithelial (MCF-7) 108383791
chr19 10862813 10864156 ZNF143 GTRD no Epithelial (MCF-7) 21848955
chr19 10862813 10864156 ZNF143 GTRD no Epithelial (MCF-7) 108383796
chr19 10862899 10864818 ZNF143 GTRD no Epithelial (MCF-7) 21848970
chr19 10862899 10864818 ZNF143 GTRD no Epithelial (MCF-7) 108383811
chr19 10862977 10865111 ZNF274 GTRD no Liver (HepG2) 21848982
chr19 10862977 10865111 ZNF274 GTRD no Liver (HepG2) 108383823
chr19 10862983 10864220 ZNF143 GTRD no Epithelial (MCF-7) 21848984
chr19 10862983 10864220 ZNF143 GTRD no Epithelial (MCF-7) 108383825
chr19 10864120 10864141 ZNF263 JASPAR yes 112436315
chr19 10864121 10864142 ZNF263 JASPAR yes 112436316
chr19 10864124 10864145 ZNF263 JASPAR yes 112436317
chr19 10864127 10864148 ZNF263 JASPAR yes 112436319
chr19 10864129 10864150 ZNF263 JASPAR yes 112436320
chr19 10864132 10864153 ZNF263 JASPAR yes 112436321
chr19 10864135 10864156 ZNF263 JASPAR yes 112436322
chr19 10864136 10864157 IRF1 JASPAR yes 112436323
chr19 10864138 10864143 ETS2 TRANSFAC yes 112436324
chr19 10864138 10864153 PRDM1 JASPAR yes 112436325
chr19 10864138 10864153 STAT2 JASPAR yes 112436326
chr19 10864138 10864159 ZNF263 JASPAR yes 112436327
chr19 10864139 10864153 STAT1 JASPAR yes 112436328
Genes associated with rs549977028[chr19:10864140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More