EnhancerDB
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  3. rs549978522[chr5:90607718]
Enhancers that have rs549978522[chr5:90607718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549978522[chr5:90607718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90607707 90607720 ELF1 JASPAR yes 64191553
chr5 90607708 90607720 ELF4 JASPAR yes 64191554
chr5 90607709 90607720 ETV2 JASPAR yes 64191555
chr5 90607710 90607720 ELK1 JASPAR yes 64191556
chr5 90607710 90607720 ELK3 JASPAR yes 64191557
chr5 90607710 90607720 ERF JASPAR yes 64191558
chr5 90607710 90607720 ERG JASPAR yes 64191559
chr5 90607710 90607720 ETS1 JASPAR yes 64191560
chr5 90607710 90607720 ETV1 JASPAR yes 64191561
chr5 90607710 90607720 ETV3 JASPAR yes 64191562
chr5 90607710 90607720 ETV4 JASPAR yes 64191563
chr5 90607710 90607720 ETV6 JASPAR yes 64191564
chr5 90607710 90607720 FEV JASPAR yes 64191565
chr5 90607710 90607720 FLI1 JASPAR yes 64191566
chr5 90607710 90607720 GABPA JASPAR yes 64191567
chr5 90607710 90607721 ELK4 JASPAR yes 64191568
chr5 90607710 90607721 FLI1 JASPAR yes 64191569
chr5 90607711 90607719 EHF JASPAR yes 64191570
chr5 90607711 90607719 FEV JASPAR yes 64191571
chr5 90607712 90607719 SPI1 JASPAR yes 64191572
Genes associated with rs549978522[chr5:90607718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More