EnhancerDB
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  3. rs549982428[chr1:203479404]
Enhancers that have rs549982428[chr1:203479404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549982428[chr1:203479404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203479385 203479406 IRF1 JASPAR yes 34633414
chr1 203479386 203479407 IRF1 JASPAR yes 34633415
chr1 203479387 203479407 RREB1 JASPAR yes 34633417
chr1 203479392 203479412 RREB1 JASPAR yes 34633419
chr1 203479393 203479408 FOXP1 JASPAR yes 34633420
chr1 203479393 203479414 IRF1 JASPAR yes 34633421
chr1 203479394 203479415 IRF1 JASPAR yes 34633422
chr1 203479395 203479415 RREB1 JASPAR yes 34633423
chr1 203479396 203479407 FOXP2 JASPAR yes 34633424
chr1 203479398 203479413 FOXP1 JASPAR yes 34633425
chr1 203479399 203479420 IRF1 JASPAR yes 34633426
chr1 203479400 203479415 FOXP1 JASPAR yes 34633427
chr1 203479400 203479421 IRF1 JASPAR yes 34633428
chr1 203479401 203479416 FOXP1 JASPAR yes 34633429
chr1 203479401 203479422 IRF1 JASPAR yes 34633430
chr1 203479402 203479417 FOXP1 JASPAR yes 34633431
chr1 203479404 203479419 FOXP1 JASPAR yes 34633432
Genes associated with rs549982428[chr1:203479404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More