EnhancerDB
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  3. rs550002025[chr12:124964084]
Enhancers that have rs550002025[chr12:124964084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550002025[chr12:124964084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124963601 124964231 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580871
chr12 124963601 124964231 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068744
chr12 124963691 124964287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580872
chr12 124963691 124964287 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068745
chr12 124963715 124964169 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580873
chr12 124963715 124964169 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068746
chr12 124964073 124964093 RREB1 JASPAR yes 124382856
chr12 124964080 124964091 GCM1 JASPAR yes 124382857
chr12 124964081 124964091 GCM2 JASPAR yes 124382858
chr12 124964083 124964103 RREB1 JASPAR yes 124382859
Genes associated with rs550002025[chr12:124964084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More