EnhancerDB
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  3. rs550016200[chr1:94782789]
Enhancers that have rs550016200[chr1:94782789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550016200[chr1:94782789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94782776 94782791 LEF1 JASPAR yes 30872098
chr1 94782778 94785074 ZNF274 GTRD no Cervix (HeLa-S3) 107815540
chr1 94782787 94782799 FOXI1 JASPAR yes 30872099
chr1 94782788 94782792 TEAD2 TRANSFAC yes 30872100
chr1 94782788 94782793 TBP TRANSFAC yes 30872101
chr1 94782788 94782794 TMF TRANSFAC yes 30872102
Genes associated with rs550016200[chr1:94782789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More