EnhancerDB
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  3. rs550025550[chr16:17475663]
Enhancers that have rs550025550[chr16:17475663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17466580 17495935 enh3923
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Adrenal Blood (Karpas-422) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs550025550[chr16:17475663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 21694771
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 108186042
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 108186043
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 21694772
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 108186044
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 108186045
chr16 17475659 17475669 PAX3 JASPAR yes 9803471
chr16 17475659 17475669 PAX7 JASPAR yes 9803472
Genes associated with rs550025550[chr16:17475663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More