EnhancerDB
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  3. rs550033091[chr12:124985432]
Enhancers that have rs550033091[chr12:124985432]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 124985154 124985447 vista15284
VISTA
Transcript factors that have rs550033091[chr12:124985432]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124985039 124985555 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580912
chr12 124985039 124985555 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108068789
chr12 124985086 124985616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580913
chr12 124985086 124985616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108068790
chr12 124985127 124985437 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21580916
chr12 124985127 124985437 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108068793
chr12 124985185 124985781 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108068794
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21580918
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108068796
chr12 124985423 124985435 NHLH1 JASPAR yes 82495333
chr12 124985423 124985435 NHLH1 JASPAR yes 124385420
chr12 124985427 124985438 TFAP2A JASPAR yes 82495334
chr12 124985427 124985438 TFAP2B JASPAR yes 82495335
chr12 124985427 124985438 TFAP2C JASPAR yes 82495336
chr12 124985427 124985438 TFAP2A JASPAR yes 124385421
chr12 124985427 124985438 TFAP2B JASPAR yes 124385422
chr12 124985427 124985438 TFAP2C JASPAR yes 124385423
chr12 124985428 124985437 TFAP2A JASPAR yes 82495337
chr12 124985428 124985437 TFAP2A JASPAR yes 124385424
Genes associated with rs550033091[chr12:124985432], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More