EnhancerDB
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  3. rs550056082[chr1:225636543]
Enhancers that have rs550056082[chr1:225636543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550056082[chr1:225636543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225636543 225636553 HOXA13 JASPAR yes 35741419
chr1 225636543 225636553 HOXB13 JASPAR yes 35741420
Genes associated with rs550056082[chr1:225636543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More