EnhancerDB
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  3. rs550072463[chr17:25573260]
Enhancers that have rs550072463[chr17:25573260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25561345 25577115 enh17059
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550072463[chr17:25573260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25573250 25573271 IRF1 JASPAR yes 53614807
chr17 25573254 25573275 IRF1 JASPAR yes 53614808
chr17 25573255 25573276 IRF1 JASPAR yes 53614809
chr17 25573256 25573277 IRF1 JASPAR yes 53614810
chr17 25573257 25573272 FOXP1 JASPAR yes 53614811
chr17 25573257 25573278 IRF1 JASPAR yes 53614812
chr17 25573258 25573279 IRF1 JASPAR yes 53614813
chr17 25573259 25573274 FOXP1 JASPAR yes 53614814
chr17 25573259 25573280 IRF1 JASPAR yes 53614815
chr17 25573260 25573275 FOXP1 JASPAR yes 53614816
chr17 25573260 25573281 IRF1 JASPAR yes 53614817
Genes associated with rs550072463[chr17:25573260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More