EnhancerDB
  1. Home
  2. SNP
  3. rs550080628[chr16:85621429]
Enhancers that have rs550080628[chr16:85621429]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85620095 85621736 vista665
VISTA
Transcript factors that have rs550080628[chr16:85621429]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 21729676
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 107686975
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 108216607
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 108216608
chr16 85619449 85621429 ZNF274 GTRD no Bone Marrow (K562) 21730576
chr16 85619449 85621429 ZNF274 GTRD no Bone Marrow (K562) 107686983
chr16 85619887 85621655 ZNF274 GTRD no Bone Marrow (K562) 21730581
chr16 85619887 85621655 ZNF274 GTRD no Bone Marrow (K562) 107686987
chr16 85620050 85622502 ZNF274 GTRD no Bone Marrow (K562) 21730583
chr16 85620050 85622502 ZNF274 GTRD no Bone Marrow (K562) 107686989
chr16 85620382 85623152 ZNF143 GTRD no Epithelial (MCF-7) 21730608
chr16 85620382 85623152 ZNF143 GTRD no Epithelial (MCF-7) 107687014
chr16 85620455 85621475 ZNF143 GTRD no Epithelial (MCF-7) 21730619
chr16 85620455 85621475 ZNF143 GTRD no Epithelial (MCF-7) 107687025
chr16 85620987 85623080 ZNF143 GTRD no Epithelial (MCF-7) 21730627
chr16 85620987 85623080 ZNF143 GTRD no Epithelial (MCF-7) 107687034
chr16 85621219 85621440 ZNF274 GTRD no Bone Marrow (K562) 21730628
chr16 85621219 85621440 ZNF274 GTRD no Bone Marrow (K562) 107687035
chr16 85621258 85621662 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730629
chr16 85621258 85621662 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107687036
chr16 85621418 85621430 INSM1 JASPAR yes 12080536
chr16 85621418 85621430 INSM1 JASPAR yes 111894694
chr16 85621426 85621845 SOX2 GTRD no Neural Stem Cells (H9) 21730630
chr16 85621426 85621845 SOX2 GTRD no Neural Stem Cells (H9) 107687037
Genes associated with rs550080628[chr16:85621429], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More