EnhancerDB
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Enhancers that have rs550083574[chr1:201494326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs550083574[chr1:201494326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201493607 201494854 ZNF143 GTRD no Epithelial (MCF-7) 107856544
chr1 201493608 201494912 ZNF143 GTRD no Epithelial (MCF-7) 107856545
chr1 201493781 201494962 ZNF274 GTRD no Liver (HepG2) 107856546
chr1 201493840 201494579 ZNF274 GTRD no Liver (HepG2) 107856547
chr1 201493927 201494531 ZNF274 GTRD no Liver (HepG2) 107856548
chr1 201493957 201494849 TCF7L2 GTRD no Colon (HCT116) 21364490
chr1 201493957 201494849 TCF7L2 GTRD no Colon (HCT116) 107856549
chr1 201493959 201494917 ZNF274 GTRD no Liver (HepG2) 107856550
chr1 201493961 201494678 ZNF274 GTRD no Liver (HepG2) 107856551
chr1 201493966 201494604 ZNF274 GTRD no Liver (HepG2) 107856552
chr1 201494001 201494924 ZNF274 GTRD no Liver (HepG2) 107856553
chr1 201494023 201494675 ZNF274 GTRD no Liver (HepG2) 107856554
chr1 201494058 201494705 ZNF274 GTRD no Liver (HepG2) 107856555
chr1 201494063 201494790 ZNF274 GTRD no Liver (HepG2) 107856556
chr1 201494063 201494890 ZNF143 GTRD no Epithelial (MCF-7) 107856557
chr1 201494086 201494795 ZNF274 GTRD no Liver (HepG2) 107856558
chr1 201494092 201494794 ZNF274 GTRD no Liver (HepG2) 107856559
chr1 201494127 201494845 ZNF143 GTRD no Epithelial (MCF-7) 107856560
chr1 201494136 201494740 ZNF274 GTRD no Liver (HepG2) 107856561
chr1 201494188 201494838 ZNF143 GTRD no Epithelial (MCF-7) 107856562
chr1 201494191 201494766 ZNF143 GTRD no Epithelial (MCF-7) 107856563
chr1 201494197 201494675 ZNF274 GTRD no Liver (HepG2) 107856564
chr1 201494216 201494751 ZNF274 GTRD no Liver (HepG2) 107856565
chr1 201494224 201494706 TCF7L2 GTRD no Colon (HCT116) 21364491
chr1 201494224 201494706 TCF7L2 GTRD no Colon (HCT116) 107856566
chr1 201494249 201494671 ZNF274 GTRD no Liver (HepG2) 107856567
chr1 201494258 201494660 ZNF143 GTRD no Epithelial (MCF-7) 107856568
chr1 201494266 201494816 ZNF143 GTRD no Epithelial (MCF-7) 107856569
chr1 201494283 201494739 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856570
chr1 201494294 201494752 ZNF274 GTRD no Liver (HepG2) 107856571
chr1 201494301 201494636 ZNF143 GTRD no Epithelial (MCF-7) 107856572
chr1 201494316 201494330 SPIC JASPAR yes 34501977
chr1 201494320 201494333 ATF4 JASPAR yes 34501978
chr1 201494321 201494328 PEA3 TRANSFAC yes 34501979
Genes associated with rs550083574[chr1:201494326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More